Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ48229.1 | SFK08028.1 | SAMN04488138_105211 | SAMN04488138_1278 | Trimethylamine monooxygenase. | Cation efflux family protein. | 0.444 |
SFJ48718.1 | SFJ48740.1 | SAMN04488138_105231 | SAMN04488138_105232 | Cu+-exporting ATPase. | Transcriptional regulator. | 0.712 |
SFJ48718.1 | SFK08028.1 | SAMN04488138_105231 | SAMN04488138_1278 | Cu+-exporting ATPase. | Cation efflux family protein. | 0.470 |
SFJ48740.1 | SFJ48718.1 | SAMN04488138_105232 | SAMN04488138_105231 | Transcriptional regulator. | Cu+-exporting ATPase. | 0.712 |
SFJ48740.1 | SFK08028.1 | SAMN04488138_105232 | SAMN04488138_1278 | Transcriptional regulator. | Cation efflux family protein. | 0.406 |
SFK08012.1 | SFK08028.1 | SAMN04488138_1277 | SAMN04488138_1278 | Helix-turn-helix domain-containing protein. | Cation efflux family protein. | 0.693 |
SFK08012.1 | SFK08044.1 | SAMN04488138_1277 | SAMN04488138_1279 | Helix-turn-helix domain-containing protein. | DNA-binding transcriptional regulator, MerR family. | 0.503 |
SFK08028.1 | SFJ48229.1 | SAMN04488138_1278 | SAMN04488138_105211 | Cation efflux family protein. | Trimethylamine monooxygenase. | 0.444 |
SFK08028.1 | SFJ48718.1 | SAMN04488138_1278 | SAMN04488138_105231 | Cation efflux family protein. | Cu+-exporting ATPase. | 0.470 |
SFK08028.1 | SFJ48740.1 | SAMN04488138_1278 | SAMN04488138_105232 | Cation efflux family protein. | Transcriptional regulator. | 0.406 |
SFK08028.1 | SFK08012.1 | SAMN04488138_1278 | SAMN04488138_1277 | Cation efflux family protein. | Helix-turn-helix domain-containing protein. | 0.693 |
SFK08028.1 | SFK08044.1 | SAMN04488138_1278 | SAMN04488138_1279 | Cation efflux family protein. | DNA-binding transcriptional regulator, MerR family. | 0.811 |
SFK08028.1 | cysC | SAMN04488138_1278 | SAMN04488138_12018 | Cation efflux family protein. | Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.410 |
SFK08044.1 | SFK08012.1 | SAMN04488138_1279 | SAMN04488138_1277 | DNA-binding transcriptional regulator, MerR family. | Helix-turn-helix domain-containing protein. | 0.503 |
SFK08044.1 | SFK08028.1 | SAMN04488138_1279 | SAMN04488138_1278 | DNA-binding transcriptional regulator, MerR family. | Cation efflux family protein. | 0.811 |
cysC | SFK08028.1 | SAMN04488138_12018 | SAMN04488138_1278 | Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | Cation efflux family protein. | 0.410 |