STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK09546.1Spermidine/putrescine transport system permease protein. (281 aa)    
Predicted Functional Partners:
SFK09538.1
Spermidine/putrescine transport system permease protein.
 
0.999
SFK09517.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  0.992
SFK13976.1
Putative spermidine/putrescine transport system permease protein.
 
 0.991
SFJ67940.1
Spermidine/putrescine transport system substrate-binding protein.
 
 
 0.963
SFJ18327.1
Spermidine/putrescine transport system permease protein.
 
 0.932
SFJ18265.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  0.918
SFJ18242.1
Spermidine/putrescine transport system substrate-binding protein.
 
 
 0.904
SFK13931.1
Putative spermidine/putrescine transport system substrate-binding protein.
 
 
 0.897
SFJ84876.1
Putative spermidine/putrescine transport system permease protein.
 
 0.863
SFK13995.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  0.840
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.