Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFJ10420.1 | SFK12787.1 | SAMN04488138_1026 | SAMN04488138_1352 | Transposase InsO and inactivated derivatives. | Transposase. | 0.423 |
| SFJ45644.1 | SFJ57689.1 | SAMN04488138_10592 | SAMN04488138_106202 | methylmalonyl-CoA mutase. | (R)-ethylmalonyl-CoA mutase. | 0.998 |
| SFJ45644.1 | SFJ57960.1 | SAMN04488138_10592 | SAMN04488138_106213 | methylmalonyl-CoA mutase. | 2-methylfumaryl-CoA hydratase. | 0.470 |
| SFJ45644.1 | SFJ90082.1 | SAMN04488138_10592 | SAMN04488138_113108 | methylmalonyl-CoA mutase. | succinyl-CoA:acetate CoA-transferase. | 0.973 |
| SFJ45644.1 | SFJ94348.1 | SAMN04488138_10592 | SAMN04488138_11543 | methylmalonyl-CoA mutase. | Phosphate butyryltransferase. | 0.659 |
| SFJ45644.1 | SFK12787.1 | SAMN04488138_10592 | SAMN04488138_1352 | methylmalonyl-CoA mutase. | Transposase. | 0.742 |
| SFJ45644.1 | sucC | SAMN04488138_10592 | SAMN04488138_106222 | methylmalonyl-CoA mutase. | succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.957 |
| SFJ45644.1 | sucD | SAMN04488138_10592 | SAMN04488138_106223 | methylmalonyl-CoA mutase. | succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.957 |
| SFJ57689.1 | SFJ45644.1 | SAMN04488138_106202 | SAMN04488138_10592 | (R)-ethylmalonyl-CoA mutase. | methylmalonyl-CoA mutase. | 0.998 |
| SFJ57689.1 | SFJ57960.1 | SAMN04488138_106202 | SAMN04488138_106213 | (R)-ethylmalonyl-CoA mutase. | 2-methylfumaryl-CoA hydratase. | 0.879 |
| SFJ57689.1 | SFJ90082.1 | SAMN04488138_106202 | SAMN04488138_113108 | (R)-ethylmalonyl-CoA mutase. | succinyl-CoA:acetate CoA-transferase. | 0.914 |
| SFJ57689.1 | SFJ94348.1 | SAMN04488138_106202 | SAMN04488138_11543 | (R)-ethylmalonyl-CoA mutase. | Phosphate butyryltransferase. | 0.659 |
| SFJ57689.1 | SFK12787.1 | SAMN04488138_106202 | SAMN04488138_1352 | (R)-ethylmalonyl-CoA mutase. | Transposase. | 0.742 |
| SFJ57689.1 | sucC | SAMN04488138_106202 | SAMN04488138_106222 | (R)-ethylmalonyl-CoA mutase. | succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.850 |
| SFJ57689.1 | sucD | SAMN04488138_106202 | SAMN04488138_106223 | (R)-ethylmalonyl-CoA mutase. | succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.849 |
| SFJ57960.1 | SFJ45644.1 | SAMN04488138_106213 | SAMN04488138_10592 | 2-methylfumaryl-CoA hydratase. | methylmalonyl-CoA mutase. | 0.470 |
| SFJ57960.1 | SFJ57689.1 | SAMN04488138_106213 | SAMN04488138_106202 | 2-methylfumaryl-CoA hydratase. | (R)-ethylmalonyl-CoA mutase. | 0.879 |
| SFJ57960.1 | SFJ90082.1 | SAMN04488138_106213 | SAMN04488138_113108 | 2-methylfumaryl-CoA hydratase. | succinyl-CoA:acetate CoA-transferase. | 0.672 |
| SFJ57960.1 | SFK12787.1 | SAMN04488138_106213 | SAMN04488138_1352 | 2-methylfumaryl-CoA hydratase. | Transposase. | 0.432 |
| SFJ57960.1 | sucC | SAMN04488138_106213 | SAMN04488138_106222 | 2-methylfumaryl-CoA hydratase. | succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.694 |
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