STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK15601.1Chain length determinant protein. (276 aa)    
Predicted Functional Partners:
SFK06857.1
Polysaccharide export outer membrane protein.
 
 0.999
SFJ44536.1
Polysaccharide export outer membrane protein.
  
 0.997
SFJ63586.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
  
 
 0.959
SFK06544.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.933
SFJ63561.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
 
 0.929
SFJ81086.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
 
 0.929
SFK18869.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
 
 0.929
SFK15579.1
Exopolysaccharide production protein ExoQ.
 
  
 0.840
SFK06837.1
Capsular exopolysaccharide family.
 
 
0.838
SFJ26197.1
Serine O-acetyltransferase.
  
 
 0.816
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
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