STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK26201.1Hypothetical protein. (417 aa)    
Predicted Functional Partners:
SDK87814.1
Peroxiredoxin family protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.835
SDK31565.1
Hypothetical protein.
  
     0.655
SDK31600.1
Hypothetical protein.
  
     0.556
SDL01406.1
acyl-CoA thioester hydrolase.
 
     0.481
SDK26227.1
Predicted arabinose efflux permease, MFS family.
       0.479
SDL07869.1
Glutamate synthase (NADPH/NADH) large chain.
      
 0.402
Your Current Organism:
Salinicoccus qingdaonensis
NCBI taxonomy Id: 576118
Other names: CGMCC 1.8895, LMG 24855, LMG:24855, S. qingdaonensis, Salinicoccus qingdaonensis Qu et al. 2012, Salinicoccus sp. ZXM223, strain ZXM223
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.