STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK89251.1Carboxypeptidase regulatory-like domain-containing protein. (316 aa)    
Predicted Functional Partners:
SDK70364.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
    0.980
SDK82997.1
N-acetylmuramoyl-L-alanine amidase.
    
  0.711
SDK89272.1
Iron complex transport system ATP-binding protein.
       0.620
SDK36062.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
    0.589
SDK22952.1
Sortase A. Cysteine peptidase. MEROPS family C60A.
    
 0.530
SDL33878.1
Conserved repeat domain-containing protein.
    
 0.448
SDL38651.1
Conserved repeat domain-containing protein.
    
 0.448
SDK89292.1
Uncharacterized lipoprotein YehR, DUF1307 family.
       0.442
SDK95971.1
Serine protease AprX; Belongs to the peptidase S8 family.
   
 
 0.429
Your Current Organism:
Salinicoccus qingdaonensis
NCBI taxonomy Id: 576118
Other names: CGMCC 1.8895, LMG 24855, LMG:24855, S. qingdaonensis, Salinicoccus qingdaonensis Qu et al. 2012, Salinicoccus sp. ZXM223, strain ZXM223
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