STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK95454.1C4-dicarboxylate transporter, DctQ subunit. (169 aa)    
Predicted Functional Partners:
SDK95482.1
C4-dicarboxylate transporter, DctM subunit.
 
 0.998
SDK95431.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
 
 0.994
SDK96330.1
TRAP transporter, DctM subunit.
 
 0.925
SDL27232.1
C4-dicarboxylate transporter, DctM subunit.
 
 0.925
SDK96266.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
  
 0.829
SDL27173.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
  
 0.829
SDK96359.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
     0.736
SDK95377.1
DNA-binding transcriptional regulator, GntR family.
 
     0.705
SDK95508.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.701
SDK95407.1
Arginine utilization protein RocB.
       0.650
Your Current Organism:
Salinicoccus qingdaonensis
NCBI taxonomy Id: 576118
Other names: CGMCC 1.8895, LMG 24855, LMG:24855, S. qingdaonensis, Salinicoccus qingdaonensis Qu et al. 2012, Salinicoccus sp. ZXM223, strain ZXM223
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.