STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY27058.1TIGR01244 family protein. (136 aa)    
Predicted Functional Partners:
SDY27029.1
Hypothetical protein.
 
     0.845
SDY27024.1
Hypothetical protein.
 
     0.843
SDY26997.1
Glyoxylase, beta-lactamase superfamily II.
 
     0.787
SDY51958.1
Sulfite reductase (NADPH) hemoprotein beta-component.
  
  
  0.531
SDY28440.1
tRNA 2-thiouridine synthesizing protein A; Belongs to the sulfur carrier protein TusA family.
    
  0.443
SDY15026.1
Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.
   
    0.442
SDY26475.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
  0.423
SDY08146.1
Sulfate permease, SulP family.
 
     0.413
Your Current Organism:
Lentibacter algarum
NCBI taxonomy Id: 576131
Other names: CGMCC 1.10234, L. algarum, LMG 24861, LMG:24861, Lentibacter algarum Li et al. 2012, alpha proteobacterium ZXM098, alpha proteobacterium ZXM100, strain ZXM100
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.