STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY29231.1Protein of unknown function. (151 aa)    
Predicted Functional Partners:
SDY29195.1
Hypothetical protein.
 
     0.956
SDY29214.1
Site-specific DNA recombinase.
 
     0.954
SDY29579.1
DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.827
SDY29342.1
Hypothetical protein.
 
     0.808
SDY29516.1
Hypothetical protein.
 
   
 0.805
SDY29561.1
Hypothetical protein.
 
  
 0.798
SDY29244.1
Hypothetical protein.
       0.773
SDY29659.1
Protein of unknown function.
 
     0.769
SDY29302.1
Hypothetical protein.
 
     0.763
SDY29416.1
Hypothetical protein.
 
     0.718
Your Current Organism:
Lentibacter algarum
NCBI taxonomy Id: 576131
Other names: CGMCC 1.10234, L. algarum, LMG 24861, LMG:24861, Lentibacter algarum Li et al. 2012, alpha proteobacterium ZXM098, alpha proteobacterium ZXM100, strain ZXM100
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.