STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY19694.1Trk system potassium uptake protein TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family. (482 aa)    
Predicted Functional Partners:
SDY56924.1
Trk system potassium uptake protein TrkA.
 
 
 0.983
SDY88974.1
Voltage-gated potassium channel.
  
 
 0.928
SDY56718.1
Voltage-gated potassium channel.
  
 
 0.925
SDY22305.1
Kef-type potassium/proton antiporter, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
   
 
 0.527
folE2
GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate.
       0.522
SDY19665.1
Hypothetical protein.
       0.486
SDY65766.1
Multisubunit potassium/proton antiporter, PhaA subunit /multisubunit potassium/proton antiporter, PhaB subunit.
     
 0.477
SDY17921.1
Cell division transport system ATP-binding protein.
   
  
 0.427
SDY10874.1
Multidrug resistance protein, MATE family.
 
     0.423
Your Current Organism:
Lentibacter algarum
NCBI taxonomy Id: 576131
Other names: CGMCC 1.10234, L. algarum, LMG 24861, LMG:24861, Lentibacter algarum Li et al. 2012, alpha proteobacterium ZXM098, alpha proteobacterium ZXM100, strain ZXM100
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