STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY07514.1Lysophospholipase L1. (233 aa)    
Predicted Functional Partners:
SDY49229.1
Phage conserved hypothetical protein, phiE125 gp8 family.
  
 0.776
SDY26311.1
Hint domain-containing protein.
  
 
  0.683
SDY30196.1
Chaperone of endosialidase.
   
 0.679
SDY07422.1
Hemolysin-type calcium-binding repeat-containing protein.
   
 0.679
SDY07448.1
Hypothetical protein.
   
 0.679
SDY53208.1
Hypothetical protein.
   
 0.679
SDY82434.1
Hypothetical protein.
   
 0.679
SDY89190.1
S-layer protein.
   
 0.679
SDY90803.1
S-layer protein.
   
 0.679
SDY11649.1
Hint domain-containing protein.
  
 
  0.664
Your Current Organism:
Lentibacter algarum
NCBI taxonomy Id: 576131
Other names: CGMCC 1.10234, L. algarum, LMG 24861, LMG:24861, Lentibacter algarum Li et al. 2012, alpha proteobacterium ZXM098, alpha proteobacterium ZXM100, strain ZXM100
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.