STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY21632.1Fe-S-cluster-containing dehydrogenase component. (243 aa)    
Predicted Functional Partners:
SDY21666.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.999
SDY21616.1
DMSO reductase anchor subunit.
 
 
 0.995
SDY26413.1
Sulfur dehydrogenase subunit SoxD.
   
 0.990
SDY68781.1
NAD-dependent formate dehydrogenase catalytic subunit /NAD-dependent formate dehydrogenase iron-sulfur protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.987
SDY26454.1
Cytochrome c.
  
 0.980
SDY47856.1
Sulfur-oxidizing protein SoxX.
  
 0.974
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.947
SDY16312.1
Translation elongation factor 1A (EF-1A/EF-Tu).
  
 
 0.947
SDY43935.1
Cytochrome c.
   
 0.945
SDY70839.1
Cytochrome c.
   
 0.945
Your Current Organism:
Lentibacter algarum
NCBI taxonomy Id: 576131
Other names: CGMCC 1.10234, L. algarum, LMG 24861, LMG:24861, Lentibacter algarum Li et al. 2012, alpha proteobacterium ZXM098, alpha proteobacterium ZXM100, strain ZXM100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.