STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gcvHGlycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (119 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
 0.999
SDY43407.1
Aminomethyltransferase.
 0.998
SDY30728.1
Aminomethyltransferase; Belongs to the GcvT family.
 
 0.990
SDY17061.1
Aminomethyltransferase; Belongs to the GcvT family.
 
 0.976
SDY28703.1
Dimethylsulfoniopropionate demethylase; Belongs to the GcvT family.
 
 0.973
SDY30980.1
Aminomethyltransferase; Belongs to the GcvT family.
 0.965
SDY81697.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
 
 0.956
SDY14409.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
 0.955
SDY81736.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
 0.955
SDY53611.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
 0.954
Your Current Organism:
Lentibacter algarum
NCBI taxonomy Id: 576131
Other names: CGMCC 1.10234, L. algarum, LMG 24861, LMG:24861, Lentibacter algarum Li et al. 2012, alpha proteobacterium ZXM098, alpha proteobacterium ZXM100, strain ZXM100
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