STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY45032.1SCP-2 sterol transfer family protein. (97 aa)    
Predicted Functional Partners:
SDY45053.1
Lysophospholipase.
       0.820
SDY65522.1
Hypothetical protein.
  
     0.669
SDY81359.1
SCP-2 sterol transfer family protein.
  
     0.660
SDY45007.1
Tetratricopeptide repeat-containing protein.
       0.638
SDY45074.1
Oligoendopeptidase F.
       0.629
SDY44964.1
Heat shock protein Hsp15.
       0.598
SDY44989.1
ATP-dependent RNA helicase SUPV3L1/SUV3.
       0.529
SDY18700.1
Exodeoxyribonuclease-5.
  
     0.520
SDY13073.1
Protein of unknown function.
  
     0.515
SDY14812.1
Hypothetical protein.
  
     0.497
Your Current Organism:
Lentibacter algarum
NCBI taxonomy Id: 576131
Other names: CGMCC 1.10234, L. algarum, LMG 24861, LMG:24861, Lentibacter algarum Li et al. 2012, alpha proteobacterium ZXM098, alpha proteobacterium ZXM100, strain ZXM100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.