Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY45805.1 | SDY45826.1 | SAMN05444486_102279 | SAMN05444486_102280 | Di-and tricarboxylate transporter. | DNA-binding regulatory protein, YebC/PmpR family. | 0.579 |
SDY45805.1 | SDY65766.1 | SAMN05444486_102279 | SAMN05444486_10347 | Di-and tricarboxylate transporter. | Multisubunit potassium/proton antiporter, PhaA subunit /multisubunit potassium/proton antiporter, PhaB subunit. | 0.508 |
SDY45805.1 | SDY66496.1 | SAMN05444486_102279 | SAMN05444486_10386 | Di-and tricarboxylate transporter. | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.446 |
SDY45805.1 | SDY81483.1 | SAMN05444486_102279 | SAMN05444486_10459 | Di-and tricarboxylate transporter. | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.446 |
SDY45826.1 | SDY45805.1 | SAMN05444486_102280 | SAMN05444486_102279 | DNA-binding regulatory protein, YebC/PmpR family. | Di-and tricarboxylate transporter. | 0.579 |
SDY65766.1 | SDY45805.1 | SAMN05444486_10347 | SAMN05444486_102279 | Multisubunit potassium/proton antiporter, PhaA subunit /multisubunit potassium/proton antiporter, PhaB subunit. | Di-and tricarboxylate transporter. | 0.508 |
SDY66496.1 | SDY45805.1 | SAMN05444486_10386 | SAMN05444486_102279 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Di-and tricarboxylate transporter. | 0.446 |
SDY66496.1 | SDY81483.1 | SAMN05444486_10386 | SAMN05444486_10459 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.779 |
SDY81483.1 | SDY45805.1 | SAMN05444486_10459 | SAMN05444486_102279 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Di-and tricarboxylate transporter. | 0.446 |
SDY81483.1 | SDY66496.1 | SAMN05444486_10459 | SAMN05444486_10386 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.779 |