Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY12087.1 | amn | SAMN05444486_101298 | SAMN05444486_103528 | Pilus assembly protein CpaC; Belongs to the bacterial secretin family. | AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations. | 0.623 |
SDY48175.1 | SDY84670.1 | SAMN05444486_102387 | SAMN05444486_10548 | Purine nucleosidase. | Adenine phosphoribosyltransferase. | 0.726 |
SDY48175.1 | ade | SAMN05444486_102387 | SAMN05444486_10158 | Purine nucleosidase. | Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family. | 0.893 |
SDY48175.1 | amn | SAMN05444486_102387 | SAMN05444486_103528 | Purine nucleosidase. | AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations. | 0.900 |
SDY48175.1 | apt | SAMN05444486_102387 | SAMN05444486_101323 | Purine nucleosidase. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.726 |
SDY48175.1 | mtnP | SAMN05444486_102387 | SAMN05444486_101326 | Purine nucleosidase. | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.910 |
SDY48175.1 | nadE | SAMN05444486_102387 | SAMN05444486_102161 | Purine nucleosidase. | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.412 |
SDY74424.1 | amn | SAMN05444486_103527 | SAMN05444486_103528 | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations. | 0.628 |
SDY74479.1 | amn | SAMN05444486_103530 | SAMN05444486_103528 | Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase. | AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations. | 0.679 |
SDY74479.1 | mtnP | SAMN05444486_103530 | SAMN05444486_101326 | Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase. | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.662 |
SDY84670.1 | SDY48175.1 | SAMN05444486_10548 | SAMN05444486_102387 | Adenine phosphoribosyltransferase. | Purine nucleosidase. | 0.726 |
SDY84670.1 | ade | SAMN05444486_10548 | SAMN05444486_10158 | Adenine phosphoribosyltransferase. | Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family. | 0.867 |
SDY84670.1 | amn | SAMN05444486_10548 | SAMN05444486_103528 | Adenine phosphoribosyltransferase. | AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations. | 0.784 |
SDY84670.1 | deoD | SAMN05444486_10548 | SAMN05444486_101641 | Adenine phosphoribosyltransferase. | Purine-nucleoside phosphorylase. | 0.858 |
SDY84670.1 | mtnP | SAMN05444486_10548 | SAMN05444486_101326 | Adenine phosphoribosyltransferase. | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.816 |
SDY84670.1 | nadE | SAMN05444486_10548 | SAMN05444486_102161 | Adenine phosphoribosyltransferase. | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.422 |
ade | SDY48175.1 | SAMN05444486_10158 | SAMN05444486_102387 | Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family. | Purine nucleosidase. | 0.893 |
ade | SDY84670.1 | SAMN05444486_10158 | SAMN05444486_10548 | Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family. | Adenine phosphoribosyltransferase. | 0.867 |
ade | amn | SAMN05444486_10158 | SAMN05444486_103528 | Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family. | AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations. | 0.921 |
ade | apt | SAMN05444486_10158 | SAMN05444486_101323 | Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.956 |
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