Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY07601.1 | SDY85271.1 | SAMN05444486_10176 | SAMN05444486_1067 | Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family. | EF hand. | 0.917 |
SDY07601.1 | ndk | SAMN05444486_10176 | SAMN05444486_102510 | Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.695 |
SDY23576.1 | SDY85271.1 | SAMN05444486_101907 | SAMN05444486_1067 | Hypothetical protein. | EF hand. | 0.878 |
SDY23576.1 | gmk | SAMN05444486_101907 | SAMN05444486_102783 | Hypothetical protein. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.630 |
SDY23576.1 | ndk | SAMN05444486_101907 | SAMN05444486_102510 | Hypothetical protein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.543 |
SDY30918.1 | SDY85271.1 | SAMN05444486_1011259 | SAMN05444486_1067 | Trimethylamine monooxygenase. | EF hand. | 0.920 |
SDY50047.1 | SDY85271.1 | SAMN05444486_102475 | SAMN05444486_1067 | Hypothetical protein. | EF hand. | 0.917 |
SDY50047.1 | ndk | SAMN05444486_102475 | SAMN05444486_102510 | Hypothetical protein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.693 |
SDY56648.1 | SDY85271.1 | SAMN05444486_102804 | SAMN05444486_1067 | Glycerol uptake facilitator (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family. | EF hand. | 0.917 |
SDY56648.1 | ndk | SAMN05444486_102804 | SAMN05444486_102510 | Glycerol uptake facilitator (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.695 |
SDY84113.1 | SDY85271.1 | SAMN05444486_10518 | SAMN05444486_1067 | Putative flavoprotein involved in K+ transport. | EF hand. | 0.920 |
SDY85271.1 | SDY07601.1 | SAMN05444486_1067 | SAMN05444486_10176 | EF hand. | Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.917 |
SDY85271.1 | SDY23576.1 | SAMN05444486_1067 | SAMN05444486_101907 | EF hand. | Hypothetical protein. | 0.878 |
SDY85271.1 | SDY30918.1 | SAMN05444486_1067 | SAMN05444486_1011259 | EF hand. | Trimethylamine monooxygenase. | 0.920 |
SDY85271.1 | SDY50047.1 | SAMN05444486_1067 | SAMN05444486_102475 | EF hand. | Hypothetical protein. | 0.917 |
SDY85271.1 | SDY56648.1 | SAMN05444486_1067 | SAMN05444486_102804 | EF hand. | Glycerol uptake facilitator (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.917 |
SDY85271.1 | SDY84113.1 | SAMN05444486_1067 | SAMN05444486_10518 | EF hand. | Putative flavoprotein involved in K+ transport. | 0.920 |
SDY85271.1 | SDY85306.1 | SAMN05444486_1067 | SAMN05444486_1069 | EF hand. | Signal transduction histidine kinase. | 0.906 |
SDY85271.1 | argD | SAMN05444486_1067 | SAMN05444486_101127 | EF hand. | acetylornithine/N-succinyldiaminopimelate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.926 |
SDY85271.1 | gmk | SAMN05444486_1067 | SAMN05444486_102783 | EF hand. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.982 |
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