STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY88037.1Various environmental stresses-induced protein Ves. (195 aa)    
Predicted Functional Partners:
SDY88131.1
Transcriptional regulator, GntR family.
 
  
 0.897
SDY67789.1
Transcriptional regulator, GntR family.
 
  
 0.764
SDY40789.1
Transcriptional regulator, RpiR family.
  
     0.718
SDY88047.1
Formiminoglutamate deiminase.
 
    0.681
SDY88091.1
Formiminoglutamase.
 
    0.641
SDY88244.1
LysR family transcriptional regulator, glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.583
SDY67845.1
Formiminoglutamase.
 
    0.550
SDY88015.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
       0.541
SDY40664.1
Predicted acetyltransferase, GNAT superfamily.
  
     0.456
SDY84402.1
Uncharacterized conserved protein, MAPEG superfamily.
  
     0.423
Your Current Organism:
Lentibacter algarum
NCBI taxonomy Id: 576131
Other names: CGMCC 1.10234, L. algarum, LMG 24861, LMG:24861, Lentibacter algarum Li et al. 2012, alpha proteobacterium ZXM098, alpha proteobacterium ZXM100, strain ZXM100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.