STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_00910Uncharacterized protein. (347 aa)    
Predicted Functional Partners:
PAC_07499
Related to SKI3-antiviral protein.
    
 0.759
PAC_12822
Probable SKI2-antiviral protein and putative helicase.
    
 0.742
PAC_12277
Related to DNA-directed RNA polymerase II accessory protein.
    
 0.719
PAC_11070
Related to LEO1 Extremely hydrophilic protein.
    
 0.708
PAC_13282
Related to UV-damaged DNA-binding protein.
    
  0.656
PAC_09199
Related to DNA-directed RNA polymerase II regulator.
    
 0.652
PAC_10897
Uncharacterized protein.
    
 0.652
PAC_04387
Related to tetratricopeptide repeat protein tpr1.
    
 0.648
PAC_16726
Related to tetratricopeptide repeat protein tpr1.
    
 0.648
PAC_03137
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.635
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
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