STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_0108660S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (106 aa)    
Predicted Functional Partners:
PAC_00462
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.999
PAC_00694
60S ribosomal protein L33.
   
 0.999
PAC_01401
Probable 60S ribosomal protein L14.
   
 0.999
PAC_01681
Probable ribosomal protein L24.e.A, cytosolic.
   
 0.999
PAC_02050
60S ribosomal protein L26.
   
 0.999
PAC_02849
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 0.999
PAC_02956
Probable ribosomal protein L22.
   
 0.999
PAC_03314
Probable 60S RIBOSOMAL PROTEIN L5.
   
 0.999
PAC_04157
Probable ribosomal protein L17.e.A (Cytosolic); Belongs to the universal ribosomal protein uL22 family.
   
 0.999
PAC_04352
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.999
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
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