STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_01499Uncharacterized protein. (413 aa)    
Predicted Functional Partners:
PAC_00685
Related to ATP-dependent DNA helicase mph1.
    
 0.512
PAC_01429
MUS-38 protein, involved in nucleotide excision repair.
    
 0.497
PAC_11812
Related to Crossover junction endonuclease MUS81.
   
 0.472
PAC_00754
Probable Deoxyuridine 5'-triphosphate nucleotidohydrolase.
   
  0.470
PAC_03928
CBFD_NFYB_HMF domain-containing protein.
   
  0.470
PAC_03927
Uncharacterized protein.
   
  0.470
PAC_05192
Uncharacterized protein.
   
  0.470
PAC_13294
Ribonuclease P protein subunit.
   
  0.460
PAC_01484
Related to ribonuclease P chain POP1.
    
 0.459
PAC_05354
Related to ribonuclease P protein subunit p30.
    
 0.458
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.