STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_03136Uncharacterized protein. (260 aa)    
Predicted Functional Partners:
PAC_04971
Related to COMPASS component SWD1.
    
 0.625
PAC_01702
Related to D-mandelate dehydrogenase.
    
 0.623
PAC_10606
Amidase domain-containing protein.
    
 0.623
PAC_13888
Related to histone-lysine N-methyltransferase.
    
 0.621
PAC_20044
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.604
PAC_10296
Related to NUP133 Nuclear pore protein.
    
 0.603
PAC_10970
Probable SEC13-protein transport protein; Belongs to the WD repeat SEC13 family.
    
 0.587
PAC_12286
Probable nucleoporin seh1; Belongs to the WD repeat SEC13 family.
    
 0.562
PAC_00162
Probable ubiquitin-like protein ubl1.
    
  0.519
PAC_05359
Related to transcription elongation factor TFIIS.
    
  0.519
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.