STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_05059Related to glyoxal oxidase. (1246 aa)    
Predicted Functional Partners:
PAC_12743
Related to GDP/GTP exchange factor Rom2p.
    
 0.638
PAC_00395
Probable nuclear protein localization factor and ER translocation component NPL4.
    
 0.583
PAC_10896
Probable nuclear transport factor 2 (Ntf-2).
    
 0.583
PAC_09684
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.561
PAC_00685
Related to ATP-dependent DNA helicase mph1.
    
 0.536
PAC_08992
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.499
PAC_19979
Uncharacterized protein.
    
  0.499
PAC_01429
MUS-38 protein, involved in nucleotide excision repair.
    
 0.497
PAC_13353
Probable replication protein A subunit.
    
  0.494
PAC_00754
Probable Deoxyuridine 5'-triphosphate nucleotidohydrolase.
   
 0.492
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.