STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_07012Uncharacterized protein. (188 aa)    
Predicted Functional Partners:
PAC_16073
Probable dynactin arp1 p62 subunit RO-2.
    
 0.996
PAC_00353
Uncharacterized protein.
    
 0.995
PAC_02901
Probable dynactin.
   
 0.994
PAC_02489
Probable DYNACTIN (150 kDa DYNEIN-ASSOCIATED POLYPEPTIDE) ro-3.
    
 0.986
PAC_00702
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.965
PAC_00524
Related to Tip elongation protein 1.
    
 0.946
PAC_08883
Actin.
    
 0.943
PAC_09468
Actin-71; Belongs to the actin family.
    
 0.943
PAC_13735
Related to dynein light intermediate chain 2.
    
 0.925
PAC_04126
Probable dynein intermediate chain.
    
 0.913
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
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