STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_07271Related to Autophagy protein 16. (199 aa)    
Predicted Functional Partners:
PAC_09712
Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.
   
 0.984
PAC_01786
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
    
 0.983
PAC_01888
Probable Autophagy-related protein 18.
   
 0.980
PAC_12758
Autophagy-related protein 3.
   
 0.963
PAC_03809
GTP-binding protein ypt1.
    
 0.855
PAC_18755
Probable apsB protein.
    
 0.855
PAC_03844
Autophagy-related protein.
    
 0.850
PAC_07988
Probable Serine/threonine-protein kinase ATG1.
    
 
 0.827
PAC_15971
Uncharacterized protein.
    
 
 0.827
PAC_13606
Phosphatidylinositol 3-kinase VPS34.
    
 0.818
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.