STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_08648Uncharacterized protein. (707 aa)    
Predicted Functional Partners:
PAC_09020
Related to DUF410 domain protein.
    
 0.966
PAC_09558
Related to chicken h-caldesmon, Uso1p and YKL201c.
    
 
 0.893
PAC_07079
Related to thioredoxin.
    
   0.884
PAC_01278
Probable UBX3 UBX (Ubiquitin regulatory X) domain-containing protein.
    
 
 0.711
GET3
ATPase GET3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...]
    
 0.699
PAC_11850
Related to protein phosphatases.
   
 0.685
PAC_11854
DUF862 domain-containing protein.
    
   0.658
PAC_01916
RING-type domain-containing protein.
    
 
 0.638
PAC_12168
Related to COP1-interacting protein CIP8.
    
 
 0.638
PAC_03581
Ubiquitin-like domain-containing protein.
    
 0.557
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
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