STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_09110Probable GTP-binding protein. (371 aa)    
Predicted Functional Partners:
PAC_10728
Probable GIR2 Highly acidic protein with anomalous electrophoretic behavior.
   
 
 0.990
PAC_01708
Probable mRNA export protein 33.
   
 
 0.961
PAC_09646
Probable translation activator GCN1.
   
 
 0.939
PAC_14756
Probable translation elongation factor eEF-3.
   
 
 0.890
PAC_01651
Related to translation elongation factor eEF3.
   
 
 0.886
PAC_04361
Probable S3 ribosomal protein; Belongs to the universal ribosomal protein uS3 family.
   
   0.849
PAC_17072
Probable ATP-dependent RNA helicase dbp9.
   
   0.845
PAC_07518
Probable RPL28-60S large subunit ribosomal protein L27a.e; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.833
PAC_06071
Probable 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
   0.830
PAC_03609
Uncharacterized protein.
   
 
 0.826
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.