STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_09905DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation. (480 aa)    
Predicted Functional Partners:
PAC_08923
Checkpoint protein; Belongs to the HUS1 family.
  
 
 0.998
PAC_03761
Related to cell cycle checkpoint protein RAD17.
   
 0.994
PAC_07827
3'-5' exonuclease domain-containing protein.
   
 0.988
PAC_07202
Related to S-M checkpoint control protein Rad4p.
    
 0.987
PAC_09010
Replication factor C subunit 4.
   
 0.987
PAC_00361
Probable replication factor protein.
   
 0.981
PAC_04747
Uncharacterized protein.
    
 0.980
PAC_04748
Probable DNA repair exonuclease rad1.
    
 0.980
PAC_02635
Probable Replication factor C subunit 5.
   
 0.975
PAC_03504
Related to replication factor C chain Rfc3.
   
 0.970
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.