STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_09952Rhomboid domain-containing protein. (278 aa)    
Predicted Functional Partners:
PAC_10935
Related to stomatin family, may link integral membrane proteins to the peripheral cytoskeleton.
   
 0.741
PAC_07952
Probable AAA protease IAP-1 (Mitochondrial intermembrane space).
   
 
 0.671
PAC_00203
Prohibitin.
   
 0.659
PAC_02599
Prohibitin.
   
 0.615
PAC_08037
Related to stomatin.
   
 0.588
PAC_07753
Uncharacterized protein.
  
    0.501
PAC_09733
Uncharacterized protein.
  
    0.501
PAC_12102
Related to methenyltetrahydrofolate synthetase.
  
    0.501
PAC_09200
Probable cell division protease ftsH.
     
 0.408
PAC_06845
Related to GTP-binding protein FZO1, required for biogenesis of mitochondria; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 
 0.403
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.