STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_10720Related to inosine-uridine preferring nucleoside hydrolase. (434 aa)    
Predicted Functional Partners:
PAC_03924
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
   
 0.690
PAC_04750
Related to cytidine deaminase.
   
 0.690
PAC_09195
PNP_UDP_1 domain-containing protein.
  
 0.675
PAC_02694
Related to M.pneumoniae uridine kinase udk.
    
 0.666
PAC_03313
Related to epoxide hydrolase.
    
 0.658
PAC_04679
Related to soluble epoxide hydrolase.
    
 0.658
PAC_11278
Related to epoxide hydrolase.
    
 0.658
PAC_14333
Related to soluble epoxide hydrolase.
    
 0.658
PAC_16617
Related to alpha/beta hydrolase.
    
 0.658
PAC_19639
Related to epoxide hydrolase.
    
 0.658
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
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