STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_12578Uncharacterized protein. (264 aa)    
Predicted Functional Partners:
PAC_02842
Related to ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family.
   
   0.964
PAC_14270
Related to MRP4-mitochondrial ribosomal protein, small subunit.
   
 
 0.956
PAC_01923
Related to ribosomal protein S5 (Mitochondrial); Belongs to the universal ribosomal protein uS5 family.
   
 
 0.954
PAC_08006
Related to ribosomal protein S15 (Mitochondrial).
   
 
 0.944
PAC_10659
Uncharacterized protein.
   
 
 0.943
PAC_03623
Probable RSM27 Mitochondrial ribosomal protein, small subunit.
   
 
 0.937
PAC_00532
Related to RSM26-mitochondrial ribosomal protein, small subunit.
   
 
 0.936
PAC_02035
Mitochondrial ribosome small subunit component S19; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.936
PAC_04035
Related to ribosomal protein YmL49, mitochondrial.
   
   0.936
PAC_07814
Related to ribosomal protein L34, mitochondrial.
   
 
 0.934
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.