STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_12878Uncharacterized protein. (985 aa)    
Predicted Functional Partners:
PAC_11812
Related to Crossover junction endonuclease MUS81.
    
 0.633
PAC_07837
Related to DNA POLYMERASE DELTA SMALL SUBUNIT.
    
 0.629
PAC_18158
DNA polymerase.
   
 0.615
PAC_09580
Uncharacterized protein.
    
 0.612
PAC_04210
Related to tpa inducible protein.
  
 
   0.549
PAC_06702
Probable HAT2-subunit of the major yeast histone acetyltransferase.
    
  0.545
PAC_12103
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.540
PAC_07827
3'-5' exonuclease domain-containing protein.
     
 0.529
PAC_10654
DUF3824 domain-containing protein.
  
 
   0.523
PAC_07137
Small nuclear ribonucleoprotein Sm D2.
    
 0.518
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.