STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_13901Related to U3 snoRNP protein. (1035 aa)    
Predicted Functional Partners:
PAC_00151
Probable UTP18 Possible U3 snoRNP protein involved in maturation of pre-18S rRNA.
   
 0.999
PAC_00418
Probable DIP2-Dom34p-interacting protein.
   
 0.999
PAC_03058
Related to UTP5 protein.
   
 0.999
PAC_06107
Related to UTP4-U3 snoRNP protein.
   
 0.999
PAC_06586
Probable periodic tryptophan protein PWP2.
   
 0.999
PAC_07313
U3 small nucleolar RNA-associated protein 22.
   
 0.999
PAC_10441
Related to Pwp2p.
  
 0.999
PAC_14139
Related to UTP6-U3 snoRNP protein.
   
 0.999
PAC_16066
Related to UTP10-U3 snoRNP protein.
   
 0.999
PAC_19098
Related to UTP13-U3 snoRNP protein.
   
 0.999
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.