STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_14459Related to methyltransferase. (402 aa)    
Predicted Functional Partners:
PAC_02725
annotation not available
   
  0.537
PAC_13995
Related to bystin.
   
  0.536
PAC_19772
Probable C-8 sterol isomerase.
   
 0.535
PAC_02440
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.528
PAC_02505
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.528
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
    
  0.526
PAC_16072
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.526
PAC_08534
40S ribosomal protein S27.
    
  0.521
PAC_09164
Probable ribosomal protein S15a.e.c10, cytosolic; Belongs to the universal ribosomal protein uS8 family.
    
  0.511
PAC_01923
Related to ribosomal protein S5 (Mitochondrial); Belongs to the universal ribosomal protein uS5 family.
    
 0.504
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.