STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_15108Related to urease accessory protein UreD. (329 aa)    
Predicted Functional Partners:
PAC_01403
Probable amidophosphoribosyltransferase.
  
 0.986
PAC_06634
Related to phosphoribosylformylglycinamidine synthase.
  
 
 0.980
PAC_09691
C-1-tetrahydrofolate synthase.
  
 0.973
PAC_09171
Probable bifunctional purine biosynthetic protein.
  
 0.950
PAC_18919
ATP-grasp domain-containing protein.
  
 0.950
PAC_00615
Related to glycinamide ribonucleotide transformylase.
  
 0.946
PAC_13651
Probable Formyltetrahydrofolate deformylase.
  
 0.946
PAC_07388
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.944
PAC_09644
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.944
PAC_00198
Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily.
  
 0.943
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.