STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_16960LysM domain-containing protein. (585 aa)    
Predicted Functional Partners:
PAC_03112
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
 0.863
PAC_03003
Uncharacterized protein.
   
 0.827
PAC_07169
Probable subunit IV of cytochrome c oxidase.
   
 0.814
PAC_09509
Related to cytochrome-c oxidase chain VIIc.
   
 0.805
PAC_14019
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.781
PAC_06645
Probable cytochrome-c oxidase chain VI.
   
 0.758
PAC_03530
Probable cytochrome c oxidase subunit V.
   
 0.736
PAC_12458
Related to ubiquinol cytochrome c reductase 8.5 kDa subunit.
   
 0.686
PAC_00093
Related to ubiquinol-cytochrome C reductase complex 7.2 kDa protein.
   
  0.607
PAC_09608
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 0.594
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.