STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_16965Probable formamidase. (330 aa)    
Predicted Functional Partners:
PAC_13125
Related to DNA mismatch repair protein.
    
 0.961
PAC_05707
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.953
PAC_00460
Related to MutS2 protein.
  
 0.911
PAC_07371
Probable DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.911
PAC_11051
Related to MSH5-meiosis-specific protein.
  
 0.911
PAC_14097
Related to 5`-3` exonuclease.
   
 0.904
PAC_00982
Related to MSH4-meiosis-specific protein.
  
 0.898
PAC_00924
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.898
PAC_00422
Vezatin domain-containing protein.
   
 0.828
PAC_00752
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.828
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.