STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_19293CHAT domain-containing protein. (1208 aa)    
Predicted Functional Partners:
PAC_00852
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.864
PAC_07282
Histone H2A; Belongs to the histone H2A family.
    
 0.675
PAC_15078
Importin subunit alpha; Belongs to the importin alpha family.
   
 
 0.675
PAC_07283
Histone H2B; Belongs to the histone H2B family.
    
 0.649
PAC_05631
Probable nudC protein.
    
  0.638
PAC_00672
Related to Caj1p.
    
 
 0.580
PAC_03809
GTP-binding protein ypt1.
    
 
 0.571
PAC_18755
Probable apsB protein.
    
 
 0.571
PAC_06874
Related to membrane protein.
    
  0.566
PAC_07083
Related to dma1, component of spindle assembly checkpoint.
    
  0.566
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
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