STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAC_19314Uncharacterized protein. (291 aa)    
Predicted Functional Partners:
PAC_19582
Related to GCN4 translational repressor GCD14 protein.
   
 0.981
PAC_18829
Related to tRNA (Adenine-N(1)-)-methyltransferase.
   
 0.947
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
  
 0.807
PAC_17415
Related to microtubule-interacting protein.
   
    0.757
TRM8
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
  
 0.707
PAC_10342
Probable ATP-dependent RNA helicase dbp3; Belongs to the DEAD box helicase family.
   
   0.694
PAC_17072
Probable ATP-dependent RNA helicase dbp9.
   
   0.694
PAC_04010
Related to nucleolar protein 12.
   
   0.674
PAC_19538
Related to ATP dependent RNA helicase.
   
   0.673
PAC_13346
RNA helicase.
   
   0.668
Your Current Organism:
Phialocephala subalpina
NCBI taxonomy Id: 576137
Other names: P. subalpina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.