STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2UXT9_NAEGRPeptidylprolyl isomerase. (100 aa)    
Predicted Functional Partners:
D2UXU6_NAEGR
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
   0.842
D2UXP1_NAEGR
Brix domain-containing protein.
   
 
 0.828
D2W1F4_NAEGR
Predicted protein.
   
   0.775
D2V1Q2_NAEGR
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
   0.769
D2VNT4_NAEGR
Nucleolar protein 5A.
   
  0.746
D2VS33_NAEGR
NOP58-like protein.
   
 
 0.743
D2VV49_NAEGR
Predicted protein.
   
 
 0.743
D2VTI3_NAEGR
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
   0.737
D2UY25_NAEGR
Nucleolar complex protein 2.
   
   0.716
D2UY23_NAEGR
Inosine-5-monophosphate dehydrogenase.
  
 
 0.711
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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