STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2UYC3_NAEGRPredicted protein. (467 aa)    
Predicted Functional Partners:
D2VWK6_NAEGR
Predicted protein.
   
 0.999
D2VPA9_NAEGR
Vacuolar sorting protein 9 domain-containing protein.
   
 
 0.978
D2VFH0_NAEGR
Predicted protein.
   
 0.947
D2UXC8_NAEGR
Predicted protein.
   
 0.879
D2VYB9_NAEGR
Predicted protein.
   
 0.835
D2UXU6_NAEGR
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
  0.784
D2VM15_NAEGR
Predicted protein.
   
 
  0.761
D2VTI3_NAEGR
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
  0.761
D2VN48_NAEGR
Predicted protein.
   
 
  0.754
D2V3B4_NAEGR
Nucleostemin family protein.
   
 
  0.742
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.