STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2V0K5_NAEGRPredicted protein. (687 aa)    
Predicted Functional Partners:
D2V763_NAEGR
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
 
  
 0.958
D2VQA5_NAEGR
Imidazolonepropionase.
  
  
 0.956
D2W5K9_NAEGR
Predicted protein.
  
  
 
0.900
D2VUR5_NAEGR
Membrane protein.
    
 0.606
D2VHT8_NAEGR
Predicted protein; Belongs to the universal ribosomal protein uS12 family.
    
 0.551
D2VFR1_NAEGR
Predicted protein; Belongs to the universal ribosomal protein uS11 family.
   
 0.549
D2VMS1_NAEGR
Predicted protein.
    
 0.549
D2VBC7_NAEGR
Predicted protein.
   
 0.544
D2VSI9_NAEGR
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
  0.543
D2VE33_NAEGR
Ribosomal protein S7; Belongs to the universal ribosomal protein uS7 family.
    
 0.541
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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