STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2V0Q7_NAEGRPredicted protein. (862 aa)    
Predicted Functional Partners:
D2VET4_NAEGR
Nucleoporin nup98.
    
 0.631
D2VH53_NAEGR
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.607
D2VMU8_NAEGR
Predicted protein; Belongs to the universal ribosomal protein uS8 family.
   
 
 0.595
D2VHP4_NAEGR
Predicted protein.
    
 0.556
D2VH63_NAEGR
Predicted protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.526
D2V7Z8_NAEGR
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.524
D2VFR1_NAEGR
Predicted protein; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.517
D2VHR1_NAEGR
Predicted protein.
   
 
 0.502
D2VU51_NAEGR
40S ribosomal protein; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.495
D2UZL9_NAEGR
Predicted protein.
    
 0.493
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.