STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2V123_NAEGREMC1_C domain-containing protein. (923 aa)    
Predicted Functional Partners:
D2UXD9_NAEGR
Predicted protein.
    
 
 0.998
D2V0U8_NAEGR
Predicted protein.
   
 0.998
D2VIZ3_NAEGR
ER membrane protein complex subunit 3.
    
 
 0.998
D2UZ02_NAEGR
Predicted protein.
    
 0.986
D2VG68_NAEGR
Predicted protein.
    
 0.942
D2VC14_NAEGR
Predicted protein.
    
 
 0.913
D2VMB2_NAEGR
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...]
   
 
 0.642
D2UZP5_NAEGR
Predicted protein.
      
 0.624
D2VN69_NAEGR
Predicted protein.
    
 
 0.603
D2V388_NAEGR
Sec61-like protein.
   
 
 0.602
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.