STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2V2B0_NAEGRPredicted protein. (860 aa)    
Predicted Functional Partners:
D2VQS1_NAEGR
ASCH domain-containing protein.
    
 
 0.950
D2V281_NAEGR
Predicted protein.
    
 0.914
D2VZX0_NAEGR
Dead box RNA helicase.
    
 0.914
D2UY12_NAEGR
U5 snRNP-specific spliceosomal protein.
    
 0.874
D2VIQ4_NAEGR
Predicted protein.
    
 0.848
D2VH54_NAEGR
Predicted protein.
    
 
 0.598
D2UY76_NAEGR
Crooked neck protein.
   
  
 0.562
D2UZ11_NAEGR
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
      
 0.485
D2VUT2_NAEGR
Predicted protein.
    
 
 0.456
D2VZN6_NAEGR
Uncharacterized protein.
      
 0.445
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.