STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2V2U5_NAEGRPoly(A)-specific ribonuclease. (707 aa)    
Predicted Functional Partners:
D2UZ22_NAEGR
Predicted protein.
     
 0.705
D2VMY9_NAEGR
Nudix hydrolase domain-containing protein.
     
 0.705
D2VA88_NAEGR
Predicted protein.
     
 0.683
D2VE23_NAEGR
3' exoribonuclease domain-containing protein.
   
 
 0.622
D2V2H2_NAEGR
Predicted protein.
     
 0.615
D2VM64_NAEGR
Predicted protein.
   
 
 0.604
D2UY02_NAEGR
Dead box RNA helicase.
   
 
 0.601
D2UXP2_NAEGR
Exosome complex exonuclease RRP43.
     
 0.599
D2VA14_NAEGR
Predicted protein.
   
 
 0.575
D2VA57_NAEGR
Predicted protein.
   
  
 0.541
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.