STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2V3C9_NAEGRPredicted protein; Belongs to the cullin family. (601 aa)    
Predicted Functional Partners:
D2UX45_NAEGR
Predicted protein.
    
 0.999
D2UY49_NAEGR
Predicted protein.
    
 0.999
D2VD12_NAEGR
Anaphase promoting complex subunit 10.
    
 0.999
NAEGRDRAFT_806
Predicted protein.
    
 0.999
D2UZS0_NAEGR
Predicted protein.
   
 0.998
D2V2G4_NAEGR
Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.997
D2V773_NAEGR
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.996
D2UYL3_NAEGR
Cell division cycle protein 27.
    
 0.959
D2VS21_NAEGR
Predicted protein.
    
 0.959
D2VJ86_NAEGR
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
    
 0.939
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.