STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2V4P7_NAEGRMalate dehydrogenase. (430 aa)    
Predicted Functional Partners:
D2VYA7_NAEGR
Fumarase class II.
  
 0.990
D2UY48_NAEGR
Fumarate hydratase class I.
  
 
 0.989
D2VD05_NAEGR
Citrate synthase; Belongs to the citrate synthase family.
  
 0.985
D2W2N7_NAEGR
Citrate synthase; Belongs to the citrate synthase family.
  
 0.985
D2W3U4_NAEGR
Citrate synthase; Belongs to the citrate synthase family.
  
 0.985
D2W2J6_NAEGR
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
  
 0.982
D2UYK0_NAEGR
Aspartate aminotransferase.
   
 0.972
D2V5T4_NAEGR
Aspartate aminotransferase.
   
 0.972
D2VW96_NAEGR
Malic enzyme.
  
 0.955
D2VWM6_NAEGR
Malic enzyme.
  
 0.955
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.