STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2V5R5_NAEGRPredicted protein. (271 aa)    
Predicted Functional Partners:
D2UXT4_NAEGR
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 
 0.876
D2VPA9_NAEGR
Vacuolar sorting protein 9 domain-containing protein.
   
  
 0.550
D2UZA5_NAEGR
Predicted protein.
      
 0.428
D2V7Y8_NAEGR
Vacuole 14 protein.
      
 0.428
AM50
Uncharacterized protein AM50.
      
 0.428
D2VP13_NAEGR
DNA repair helicase UVH6.
      
 0.428
D2VB66_NAEGR
Predicted protein.
      
 0.403
D2VRU3_NAEGR
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
      
 0.400
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.