STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2VAN4_NAEGRPredicted protein. (391 aa)    
Predicted Functional Partners:
D2V2C0_NAEGR
Nitrate reductase.
  
 
 0.780
D2W074_NAEGR
Predicted protein; Belongs to the cytochrome b5 family.
  
 
 0.780
D2W323_NAEGR
Predicted protein.
   
  
 0.633
D2V518_NAEGR
Beta-ketoacyl synthase.
   
 
 0.605
D2VZ44_NAEGR
Predicted protein.
   
 
 0.605
D2UX79_NAEGR
Elongation of fatty acids protein.
   
 
 0.455
D2UYB3_NAEGR
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
   
  
 0.454
D2VQD9_NAEGR
Predicted protein.
    
 0.423
D2VZ27_NAEGR
Predicted protein.
    
 0.423
D2V701_NAEGR
Predicted protein.
    
 0.408
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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